Too many click actions on protoype take seconds to run

I have a complex prototype where there are several actions that take place on click, but they take 2 seconds or longer to run. There are three variable getting incremented. There’s a hover state. There’s conditional logic on a text string. There’s various element getting turned on and off. However, it’s not more interactions than would normally happen in an application. If I cut out the adding or subtracting of the three variable and eliminate some of the conditional logic, it functions better, but is there something I am doing wrong or is there just a limit on the interactions. I looked at memory usage, cpu usage, and file size and they are all low. I am running this on 3 year old mac book pro.