Hidden variables still show up in libraries

With the new variables feature, I set these values up as primitives to be used as tokens. I then created the tokens by referencing the primitives. By unchecking everything within the primitives variables, I expected to not be able to select these primitives within the fill, but rather my tokens.

Am I wrong in that assumption or is there a bug? I have refreshed the tab, but it didn’t change anything.

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