Could you try using the “Regenerate all instances (slow)” option through Quick Actions (Mac: ⌘ Command+ / or ⌘ Command+P, Windows: Control + / or Control+P)? This will essentially reset the instances.
I completely understand your concern and asked internally before. The “Regenerate all instances (slow)” function essentially clicks through all instances again. If you’re experiencing any display or alignment issues, this might help resolve them. It shouldn’t cause any other problems—it’s just like refreshing all instances on the backend.
I just tried both ways on the main file, and it kinda works (?).
When I play the prototype and go to the page, it still has the same problem, but when I reload the tab, it fixes the issue, BUT when i go to another page and back, the problem is back.
Thanks for the quick fix, but it feels more like a temporary solution. If you need us to look into it further, feel free to file a bug report here: Submit a bug report!